Unveiling the impact of deforestation on soil saprotrophic fungal community composition in Mau Forest ecosystem in rift valley, Kenya
DOI:
https://doi.org/10.32734/jopt.v13i2.22886Keywords:
deforestation, fungal diversity, Mau Forest, saprotrophic fungi, soil biodiversity.Abstract
This study assessed how deforestation affected the diversity, richness, and community composition of soil saprotrophic fungus in Kenya's Mau Forest. Soil samples were collected from 60 plots across three disturbance levels (undisturbed, partially deforested, and deforested sites) during rainy and dry seasons. Fungal diversity was studied using colony-forming units (CFUs) and Shannon diversity indices, while soil physicochemical properties (pH, organic matter, nitrogen, and phosphorus) were assessed. Non-metric multidimensional scaling (NMDS), ANOVA, and Tukey's post hoc tests were used to evaluate differences and correlations. Fungal diversity and abundance significantly decreased with increasing disturbance. Diversity (Shannon index: 3.8 ± 0.3) and abundance (5.6 × 10⁵ CFU/g) were highest at undisturbed sites, followed by partially deforested (2.9 ± 0.4; 3.1 × 10⁵ CFU/g) and deforested (1.5 ± 0.2; 1.2 × 10⁵ CFU/g) sites. Boxplots showed significant differences, with the highest richness at undisturbed sites. NMDS revealed distinct fungal communities: Rhizopus and Mucor occurred in deforested areas, whereas Trichoderma and Penicillium dominated undisturbed sites. Fungal diversity and abundance were higher during the wet season but lowest at deforested sites throughout both seasons. Nitrogen (r = 0.78, p < 0.05) and organic matter (r = 0.84, p < 0.01) showed positive associations, whereas phosphorus showed a negative association (r = -0.65, p < 0.05). Deforested soils had the lowest nitrogen (2.1% ± 0.3) and organic matter (15.6% ± 1.2) compared with undisturbed soils (5.3% ± 0.9; 0.8% ± 0.1). The study emphasizes deforestation's negative consequences and the need for replanting and sustainable land-use practices.
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References
Assefa, D., Rewald, B., Sandén, H., Rosinger, C., Abiyu, A., Yitaferu, B., & Godbold, D. L. (2017). Deforestation and land use strongly effect soil organic carbon and nitrogen stock in Northwest Ethiopia. Catena, 153, 89–99. https://doi.org/10.1016/j.catena.2017.02.003
Bewernick, T., Rufino, M., Mora, B., & Ur, W. (2016). Mapping Forest Degradation in the Mau Forest Complex Using NDFI Time Series.
Bödeker, I. T. M., Lindahl, B. D., Olson, Å., & Clemmensen, K. E. (2016). Mycorrhizal and saprotrophic fungal guilds compete for the same organic substrates but affect decomposition differently. Functional Ecology, 30(12), 1967–1978. https://doi.org/10.1111/1365-2435.12677
Chivian, E. (n.d.). Biodiversity: Its Importance to Human Health A Project of the Center for Health and the Global Environment Harvard Medical School under the auspices of the World Health Organization, the United Nations Development Programme, and the United Nations Environment Programme. www.med.harvard.edu/chge
Cookson, W. R., Murphy, D. V., & Roper, M. M. (2008). Characterizing the relationships between soil organic matter components and microbial function and composition along a tillage disturbance gradient. Soil Biology and Biochemistry, 40(3), 763–777. https://doi.org/10.1016/j.soilbio.2007.10.011
Duguid, M. C., & Ashton, M. S. (2013). A meta-analysis of the effect of forest management for timber on understory plant species diversity in temperate forests. In Forest Ecology and Management (Vol. 303, pp. 81–90). https://doi.org/10.1016/j.foreco.2013.04.009
Forest, M., Jebiwott, A., Morara Ogendi, G., Kaseya Kazaba, P., & Akintunde Alo, A. (n.d.). An Assessment of the Process and Impacts of Evictions on Livelihoods in.
Grinhut, T., Hadar, Y., & Chen, Y. (2007). Degradation and transformation of humic substances by saprotrophic fungi: processes and mechanisms. In Fungal Biology Reviews (Vol. 21, Issue 4, pp. 179–189). https://doi.org/10.1016/j.fbr.2007.09.003
Jones, M. D., Durall, D. M., & Cairney, J. W. G. (2003). Ectomycorrhizal fungal communities in young forest stands regenerating after clearcut logging. In New Phytologist (Vol. 157, Issue 3, pp. 399–422). https://doi.org/10.1046/j.1469-8137.2003.00698.x
Kim, S., Axelsson, E. P., Girona, M. M., & Senior, J. K. (2021). Continuous-cover forestry maintains soil fungal communities in Norway spruce dominated boreal forests. Forest Ecology and Management, 480. https://doi.org/10.1016/j.foreco.2020.118659
Kubartová, A., Ranger, J., Berthelin, J., & Beguiristain, T. (2009). Diversity and decomposing ability of saprophytic fungi from temperate forest litter. Microbial Ecology, 58(1), 98–107. https://doi.org/10.1007/s00248-008-9458-8
Lebreton, A., Zeng, Q., Miyauchi, S., Kohler, A., Dai, Y.-C., & Martin, F. M. (2025). Evolution of the Mode of Nutrition in Symbiotic and Saprotrophic Fungi in Forest Ecosystems. 26. https://doi.org/10.1146/annurev-ecolsys-012021
Lindahl, B. D., & Tunlid, A. (2015). Ectomycorrhizal fungi - potential organic matter decomposers, yet not saprotrophs. In New Phytologist (Vol. 205, Issue 4, pp. 1443–1447). Blackwell Publishing Ltd. https://doi.org/10.1111/nph.13201
Lladó, S., López-Mondéjar, R., & Baldrian, P. (2017). Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change. Microbiology and Molecular Biology Reviews, 81(2). https://doi.org/10.1128/mmbr.00063-16
Manoharachary, C., Sridhar, K., Singh, R., Adholeya, A., Suryanarayanan, T. S., Rawat, S., & Johri, B. N. (2005). Fungal biodiversity: Distribution, conservation and prospecting of fungi from India. In Current Science (Vol. 89, Issue 1). https://about.jstor.org/terms
Marques, N. C. S., Machado, R. B., Aguiar, L. M. S., Mendonça-Galvão, L., Tidon, R., Vieira, E. M., Marini-Filho, O. J., & Bustamante, M. (2022). Drivers of change in tropical protected areas: Long-term monitoring of a Brazilian biodiversity hotspot. In Perspectives in Ecology and Conservation (Vol. 20, Issue 2, pp. 69–78). Associacao Brasileira de Ciencia Ecologica e Conservacao. https://doi.org/10.1016/j.pecon.2022.02.001
Mau, W. (2018). Coordinated Water Towers Conservation (2 nd Quarter).
Mayer, M., Rosinger, C., Gorfer, M., Berger, H., Deltedesco, E., Bässler, C., Müller, J., Seifert, L., Rewald, B., & Godbold, D. L. (2022). Surviving trees and deadwood moderate changes in soil fungal communities and associated functioning after natural forest disturbance and salvage logging. Soil Biology and Biochemistry, 166. https://doi.org/10.1016/j.soilbio.2022.108558
McGlone, M. S., Buitenwerf, R., & Richardson, S. J. (2016). The formation of the oceanic temperate forests of New Zealand. In New Zealand Journal of Botany (Vol. 54, Issue 2, pp. 128–155). Taylor and Francis Ltd. https://doi.org/10.1080/0028825X.2016.1158196
Ning, Q., Chen, L., Zhang, C., Ma, D., Li, D., Han, X., Cai, Z., Huang, S., & Zhang, J. (2021). Saprotrophic fungal communities in arable soils are strongly associated with soil fertility and stoichiometry. Applied Soil Ecology, 159. https://doi.org/10.1016/j.apsoil.2020.103843
Njuguini, S. K. M., Nyawira, M. M., Wachira, P. M., Okoth, S., Muchai, S. M., & Saado, A. H. (2018). Effects of land use on the diversity of Macrofungi in Kereita Forest Kikuyu Escarpment, Kenya. Current Research in Environmental and Applied Mycology, 8(2), 254–281. https://doi.org/10.5943/cream/8/2/10
Ódor, P., Király, I., Tinya, F., Bortignon, F., & Nascimbene, J. (2013). Patterns and drivers of species composition of epiphytic bryophytes and lichens in managed temperate forests. Forest Ecology and Management, 306, 256–265. https://doi.org/10.1016/j.foreco.2013.07.001
Ong, J. E., Wooi, &, & Gong, K. (2013). STRUCTURE, FUNCTION STRUCTURE, FUNCTION AND MANAGEMENT OF AND MANAGEMENT OF MANGROVE ECOSYSTEMS MANGROVE ECOSYSTEMS.
Otero, J. D., Figueroa, A., Muñoz, F. A., & Peña, M. R. (2011). Loss of soil and nutrients by surface runoff in two agro-ecosystems within an Andean paramo area. Ecological Engineering, 37(12), 2035–2043. https://doi.org/10.1016/j.ecoleng.2011.08.001
Rasiah, V., Florentine, S. K., Williams, B. L., & Westbrooke, M. E. (2004). The impact of deforestation and pasture abandonment on soil properties in the wet tropics of Australia. Geoderma, 120(1–2), 35–45. https://doi.org/10.1016/j.geoderma.2003.08.008
Rosa, C. A., Lachance, M. A., Limtong, S., Santos, A. R. O., Landell, M. F., Gombert, A. K., Morais, P. B., Sampaio, J. P., Gonçalves, C., Gonçalves, P., Góes-Neto, A., Santa-Brígida, R., Martins, M. B., Janzen, D. H., & Hallwachs, W. (2023). Yeasts from tropical forests: Biodiversity, ecological interactions, and as sources of bioinnovation. In Yeast (Vol. 40, Issue 11, pp. 511–539). John Wiley and Sons Ltd. https://doi.org/10.1002/yea.3903
Talbot, J. M., Bruns, T. D., Smith, D. P., Branco, S., Glassman, S. I., Erlandson, S., Vilgalys, R., & Peay, K. G. (2013). Independent roles of ectomycorrhizal and saprotrophic communities in soil organic matter decomposition. Soil Biology and Biochemistry, 57, 282–291. https://doi.org/10.1016/j.soilbio.2012.10.004
Tinya, F., Kovács, B., Aszalós, R., Tóth, B., Csépányi, P., Németh, C., & Ódor, P. (2020). Initial regeneration success of tree species after different forestry treatments in a sessile oak-hornbeam forest. Forest Ecology and Management, 459. https://doi.org/10.1016/j.foreco.2019.117810
Tomao, A., Antonio Bonet, J., Castaño, C., & de-Miguel, S. (2020). How does forest management affect fungal diversity and community composition? Current knowledge and future perspectives for the conservation of forest fungi. In Forest Ecology and Management (Vol. 457). Elsevier B.V. https://doi.org/10.1016/j.foreco.2019.117678
Touré, G. P. T., Koné, A. W., Nandjui, J., Ebou, A. E. T., Otinga, A. N., Maïga, A. A., Kouadjo, C. G. Z., Tiho, S., & Zézé, A. (2023). Changes in arbuscular mycorrhizal fungal communities, mycorrhizal soil infectivity, and phosphorus availability under Chromolaena odorata (Asteraceae) invasions in a West-African forest-savanna ecotone. Mycorrhiza, 33(4), 257–275. https://doi.org/10.1007/s00572-023-01113-9
Treseder, K. K., & Lennon, J. T. (2015). Fungal Traits That Drive Ecosystem Dynamics on Land. Microbiology and Molecular Biology Reviews, 79(2), 243–262. https://doi.org/10.1128/mmbr.00001-15
Vandegrift, R., Newman, D. S., Dentinger, B. T. M., Batallas-Molina, R., Dueñas, N., Flores, J., Goyes, P., Jenkinson, T. S., McAlpine, J., Navas, D., Policha, T., Thomas, D. C., & Roy, B. A. (2023). Richer than Gold: the fungal biodiversity of Reserva Los Cedros, a threatened Andean cloud forest. Botanical Studies, 64(1). https://doi.org/10.1186/s40529-023-00390-z
Wang, C., Liu, D., & Bai, E. (2018). Decreasing soil microbial diversity is associated with decreasing microbial biomass under nitrogen addition. In Soil Biology and Biochemistry (Vol. 120, pp. 126–133). Elsevier Ltd. https://doi.org/10.1016/j.soilbio.2018.02.003
Zhou, Z., Wang, C., Ren, C., & Sun, Z. (2020). Effects of thinning on soil saprotrophic and ectomycorrhizal fungi in a Korean larch plantation. Forest Ecology and Management, 461. https://doi.org/10.1016/j.foreco.2020.117920.
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